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	<id>https://glycan.mit.edu/CFGparadigms/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=Jim+Paulson</id>
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		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=1057</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=1057"/>
		<updated>2010-07-20T13:54:38Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Glycan array */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Kikly 2009&amp;quot;&amp;gt;&lt;br /&gt;
Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Floyd H  2000&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot; Tateno 1125&amp;quot;&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Bochner 4307 &amp;quot;&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-4312 (2005).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Nutku, E 2003&amp;quot;&amp;gt;&lt;br /&gt;
Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004 here]) to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX] &amp;lt;ref name=&amp;quot; Bochner 4307 &amp;quot;&amp;gt;&lt;br /&gt;
&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot; Tateno 1125&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
Siglec-8 is expressed in human eosinophils and mast cells, and weakly in basophils. &amp;lt;ref name=&amp;quot; Kikly 2009&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Floyd H  2000&amp;quot;&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6.&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis. &amp;lt;ref name=&amp;quot; Nutku, E 2003&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for [http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Human&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit human ] and [http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Mouse&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit mouse] eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for [http://www.functionalglycomics.org/static/coreE/flash/search.swf?maExpKey=100393 murine eosinophils] that relates to the enzymes required for expression of cis ligands of Siglec-F on these cells.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge. &amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004 ligand for Siglec-8] [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] and its murine paralog, [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004 Siglec-F ] [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004], was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds. To see all glycan array results for Siglec-8, click [http://www.functionalglycomics.org/glycomics/search/jsp/result.jsp?query=siglec-8&amp;amp;cat=coreh here].&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=1056</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=1056"/>
		<updated>2010-07-20T13:50:56Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Glycogene microarray */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Kikly 2009&amp;quot;&amp;gt;&lt;br /&gt;
Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Floyd H  2000&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot; Tateno 1125&amp;quot;&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Bochner 4307 &amp;quot;&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-4312 (2005).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Nutku, E 2003&amp;quot;&amp;gt;&lt;br /&gt;
Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004 here]) to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX] &amp;lt;ref name=&amp;quot; Bochner 4307 &amp;quot;&amp;gt;&lt;br /&gt;
&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot; Tateno 1125&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
Siglec-8 is expressed in human eosinophils and mast cells, and weakly in basophils. &amp;lt;ref name=&amp;quot; Kikly 2009&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Floyd H  2000&amp;quot;&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6.&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis. &amp;lt;ref name=&amp;quot; Nutku, E 2003&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for [http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Human&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit human ] and [http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Mouse&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit mouse] eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for [http://www.functionalglycomics.org/static/coreE/flash/search.swf?maExpKey=100393 murine eosinophils] that relates to the enzymes required for expression of cis ligands of Siglec-F on these cells.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge. &amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8 (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004 here]) and its murine paralog, Siglec-F (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004 here]), was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds. To see all glycan array results for Siglec-8, click [http://www.functionalglycomics.org/glycomics/search/jsp/result.jsp?query=siglec-8&amp;amp;cat=coreh here].&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=1055</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=1055"/>
		<updated>2010-07-20T12:59:47Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Glycan profiling */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Kikly 2009&amp;quot;&amp;gt;&lt;br /&gt;
Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Floyd H  2000&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot; Tateno 1125&amp;quot;&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Bochner 4307 &amp;quot;&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-4312 (2005).&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Nutku, E 2003&amp;quot;&amp;gt;&lt;br /&gt;
Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004 here]) to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX] &amp;lt;ref name=&amp;quot; Bochner 4307 &amp;quot;&amp;gt;&lt;br /&gt;
&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot; Tateno 1125&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
Siglec-8 is expressed in human eosinophils and mast cells, and weakly in basophils. &amp;lt;ref name=&amp;quot; Kikly 2009&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;ref name=&amp;quot; Floyd H  2000&amp;quot;&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6.&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis. &amp;lt;ref name=&amp;quot; Nutku, E 2003&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for [http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Human&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit human ] and [http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Mouse&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit mouse] eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils that relates to the enzymes required for expression of cis ligands of Siglec-F on these cells (click [http://www.functionalglycomics.org/static/coreE/flash/search.swf?maExpKey=100393 here]).&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge. &amp;lt;ref name=&amp;quot; Zhang 2007&amp;quot;&amp;gt;&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8 (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004 here]) and its murine paralog, Siglec-F (click [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004 here] and [http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004 here]), was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds. To see all glycan array results for Siglec-8, click [http://www.functionalglycomics.org/glycomics/search/jsp/result.jsp?query=siglec-8&amp;amp;cat=coreh here].&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=CD22&amp;diff=1054</id>
		<title>CD22</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=CD22&amp;diff=1054"/>
		<updated>2010-07-20T12:53:18Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;CD22 is predominantly expressed on B cells and is well documented as a regulator of B cell receptor (BCR) signaling&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;&amp;gt;Crocker PR, Paulson JC, Varki A. [http://www.ncbi.nlm.nih.gov/pubmed/17380156 Siglecs and their roles in the immune system]. &amp;#039;&amp;#039;Nat Rev Immunol&amp;#039;&amp;#039; 2007 Apr;7(4):255-66. Review.&amp;lt;/ref&amp;gt;. It is one of four siglecs that are highly conserved among mammals. This paradigm is unique among the siglecs in that the cytoplasmic domain has six conserved tyrosine motifs, including three immunoreceptor tyrosine inhibitory motifs (ITIM), one ITIM-like motif, and a growth factor receptor bound protein2 (GRB2) motif. These tyrosine motifs are involved in regulation of BCR signaling and also mediate its constitutive clathrin mediated endocytosis, an activity believed to be tied to its regulation of cell signaling. The preferred glycan ligand of CD22 differs significantly in humans and mice&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;&amp;gt;Kimura N, Ohmori K, Miyazaki K, Izawa M, Matsuzaki Y, Yasuda Y, Takematsu H, Kozutsumi Y, Moriyama A, Kannagi R. [http://www.ncbi.nlm.nih.gov/pubmed/17728258 Human B-lymphocytes express alpha2-6-sialylated 6-sulfo-N-acetyllactosamine serving as a preferred ligand for CD22/Siglec-2]. J&amp;#039;&amp;#039; Biol Chem&amp;#039;&amp;#039;. 2007 Nov 2;282(44):32200-7.&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Blixt 2004&amp;quot;&amp;gt;Blixt O, Head S, Mondala T, Scanlan C, Huflejt ME, Alvarez R, Bryan MC, Fazio F, Calarese D, Stevens J, Razi N, Stevens DJ, Skehel JJ, van Die I, Burton DR, Wilson IA, Cummings R, Bovin N, Wong CH, Paulson JC. [http://www.ncbi.nlm.nih.gov/pubmed/15563589 Printed covalent glycan array for ligand profiling of diverse glycan binding proteins]. &amp;#039;&amp;#039;Proc Natl Acad Sci U S A&amp;#039;&amp;#039;. 2004 Dec 7;101(49):17033-8.&amp;lt;/ref&amp;gt;. While both recognize the sequence Siaa-2-6Galb-1-4GlcNAc expressed abundantly on B cells, murine CD22 prefers Neu5Gc (not found in humans) over Neu5Ac, while human CD22 exhibits highest affinity for sulfated sialoside, Neu5Aca-2-6Galb-1-4[6S]GlcNAc, demonstrating significant evolution of ligand specificity with conservation of function. Although CD22 recognizes ligands on the same cell in &amp;#039;&amp;#039;cis&amp;#039;&amp;#039;, it also binds to ligands in &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; if expressed on adjacent contacting cells. A major area of investigation is to understand the relative roles of &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; and &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands in CD22 function.&lt;br /&gt;
&lt;br /&gt;
[[Image:SiglecCD22.jpg|right|alt text]]&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
&lt;br /&gt;
CFG Participating Investigators (PIs) have made major contributions to the understanding of the biology of human and murine CD22. These include: Nicolai Bovin, Paul Crocker, Jamey Marth, David Nemazee, Lars Nitschke, Jim Paulson, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
Although CD22 is highly conserved throughout mammalian species, murine and human CD22 are known to exhibit significant differences in their specificities that appear to have evolved to compensate for changes in the glycan ligands expressed on B cells.  While both bind Sia&amp;amp;alpha;2-6Gal terminated glycans, murine CD22 prefers NeuGc (NeuGc&amp;amp;alpha;2-6Gal&amp;amp;beta;1-4GlcNAc), which is not found in humans.  In contrast, human human CD22 recognizes NeuAc and NeuGc with equal affinity. In addition, however, human CD22 exhibits highest affinity for a ligand with sulfate at the 6 position of GlcNAc (NeuAc&amp;amp;alpha;2-6Gal&amp;amp;beta;1-4[6S]GlcNAc).&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;/&amp;gt;  9-O-acetylation of sialic acid abrogates binding of CD22, which is thought to regulate the binding of &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; ligands on B cells.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
CD22 is primarily expressed on mature B cells and to a lesser extent on memory B cells.  However, it is not expressed on pre-B cells and differentiated plasma cells.  Like many siglecs, CD22 interacts with endogenous ligands on B cells in &amp;#039;&amp;#039;cis&amp;#039;&amp;#039;, and on other cells, such as T cells and bone marrow vessel endothelial cells in &amp;#039;&amp;#039;trans&amp;#039;&amp;#039;.  Although  &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; ligands of tend to mask the CD22 binding site, CD22 is able to interact with &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands on contacting cells (B cells and T cells), and to bind to synthetic multivalent ligands that have sufficient avidity.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
The ligands of CD22 are predominately the product of a single sialyltransferase, ST6Gal I.  Mice deficient in ST6Gal I express no ligands on B cells resulting in an immuno-deficient phenotype.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
Although the crystal structure of CD22 has not yet been elucidated, structures of other siglecs, including sialoadhesin, siglec-5 and siglec-7 have shed insights into the nature of the ligand binding site of CD22.&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=CD22&amp;amp;maxresults=20 CFG database search results for CD22].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
&lt;br /&gt;
The CFG glycogene microarray has been used to show that ST6Gal I is downregulated  [https://www.functionalglycomics.org/glycomics/publicdata/microarray.jsp?resReqId=cfg_rRequest_2 &amp;#039;on T cells] upon activation suggesting that B cell &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands are reduced on activated T cells.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in [https://www.functionalglycomics.org/static/consortium/resources/resourcecoref16.shtml CD22] and the sialyltransferase, ST6Gal I, responsible for synthesis of its ligands ([https://www.functionalglycomics.org/glycomics/publicdata/phenotyping.jsp ST6Gal I]) distributed by the CFG have been instrumental in understanding the biology of CD22.&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The CFG&amp;#039;s glycan array was instrumental in identification of the [http://www.functionalglycomics.org/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_1792 high affinity ligands of CD22] as sialylated-sulfated glycans.&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Blixt 2004&amp;quot;/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
&lt;br /&gt;
This paradigm is unique among the siglecs in that the cytoplasmic domain has six conserved tyrosine motifs, including three immunoreceptor tyrosine inhibitory motifs (ITIM), one ITIM-like motif, and a growth factor receptor bound protein2 (GRB2) motif.  However, other members of the homologous siglec family have contributed to an understanding of the glycan binding site of CD22, and general principles governing the interaction of CD22 with &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; and &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Paul Crocker, James Paulson&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=CD22&amp;diff=1043</id>
		<title>CD22</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=CD22&amp;diff=1043"/>
		<updated>2010-07-20T01:29:38Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;CD22 is predominantly expressed on B cells and is well documented as a regulator of B cell receptor (BCR) signaling&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;&amp;gt;Crocker PR, Paulson JC, Varki A. [http://www.ncbi.nlm.nih.gov/pubmed/17380156 Siglecs and their roles in the immune system]. &amp;#039;&amp;#039;Nat Rev Immunol&amp;#039;&amp;#039; 2007 Apr;7(4):255-66. Review.&amp;lt;/ref&amp;gt;. It is one of four siglecs that are highly conserved among mammals. This paradigm is unique among the siglecs in that the cytoplasmic domain has six conserved tyrosine motifs, including three immunoreceptor tyrosine inhibitory motifs (ITIM), one ITIM-like motif, and a growth factor receptor bound protein2 (GRB2) motif. These tyrosine motifs are involved in regulation of BCR signaling and also mediate its constitutive clathrin mediated endocytosis, an activity believed to be tied to its regulation of cell signaling. The preferred glycan ligand of CD22 differs significantly in humans and mice&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;&amp;gt;Kimura N, Ohmori K, Miyazaki K, Izawa M, Matsuzaki Y, Yasuda Y, Takematsu H, Kozutsumi Y, Moriyama A, Kannagi R. [http://www.ncbi.nlm.nih.gov/pubmed/17728258 Human B-lymphocytes express alpha2-6-sialylated 6-sulfo-N-acetyllactosamine serving as a preferred ligand for CD22/Siglec-2]. J&amp;#039;&amp;#039; Biol Chem&amp;#039;&amp;#039;. 2007 Nov 2;282(44):32200-7.&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Blixt O, Head S, Mondala T, Scanlan C, Huflejt ME, Alvarez R, Bryan MC, Fazio F, Calarese D, Stevens J, Razi N, Stevens DJ, Skehel JJ, van Die I, Burton DR, Wilson IA, Cummings R, Bovin N, Wong CH, Paulson JC. [http://www.ncbi.nlm.nih.gov/pubmed/15563589 Printed covalent glycan array for ligand profiling of diverse glycan binding proteins]. &amp;#039;&amp;#039;Proc Natl Acad Sci U S A&amp;#039;&amp;#039;. 2004 Dec 7;101(49):17033-8.&amp;lt;/ref&amp;gt;. While both recognize the sequence Siaa-2-6Galb-1-4GlcNAc expressed abundantly on B cells, murine CD22 prefers Neu5Gc (not found in humans) over Neu5Ac, while human CD22 exhibits highest affinity for sulfated sialoside, Neu5Aca-2-6Galb-1-4[6S]GlcNAc, demonstrating significant evolution of ligand specificity with conservation of function. Although CD22 recognizes ligands on the same cell in &amp;#039;&amp;#039;cis&amp;#039;&amp;#039;, it also binds to ligands in &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; if expressed on adjacent contacting cells. A major area of investigation is to understand the relative roles of &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; and &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands in CD22 function.&lt;br /&gt;
&lt;br /&gt;
[[Image:SiglecCD22.jpg|right|alt text]]&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
&lt;br /&gt;
CFG Participating Investigators (PIs) have made major contributions to the understanding of the biology of human and murine CD22. These include: Nicolai Bovin, Paul Crocker, Jamey Marth, David Nemazee, Lars Nitschke, Jim Paulson, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
Although CD22 is highly conserved throughout mammalian species, murine and human CD22 are known to exhibit significant differences in their specificities that appear to have evolved to compensate for changes in the glycan ligands expressed on B cells.  While both bind Sia&amp;amp;alpha;2-6Gal terminated glycans, murine CD22 prefers NeuGc (NeuGc&amp;amp;alpha;2-6Gal&amp;amp;beta;1-4GlcNAc), which is not found in humans.  In contrast, human human CD22 recognizes NeuAc and NeuGc with equal affinity. In addition, however, human CD22 exhibits highest affinity for a ligand with sulfate at the 6 position of GlcNAc (NeuAc&amp;amp;alpha;2-6Gal&amp;amp;beta;1-4[6S]GlcNAc).&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;/&amp;gt;  9-O-acetylation of sialic acid abrogates binding of CD22, which is thought to regulate the binding of &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; ligands on B cells.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
CD22 is primarily expressed on mature B cells and to a lesser extent on memory B cells.  However, it is not expressed on pre-B cells and differentiated plasma cells.  Like many siglecs, CD22 interacts with endogenous ligands on B cells in &amp;#039;&amp;#039;cis&amp;#039;&amp;#039;, and on other cells, such as T cells and bone marrow vessel endothelial cells in &amp;#039;&amp;#039;trans&amp;#039;&amp;#039;.  Although  &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; ligands of tend to mask the CD22 binding site, CD22 is able to interact with &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands on contacting cells (B cells and T cells), and to bind to synthetic multivalent ligands that have sufficient avidity.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
The ligands of CD22 are predominately the product of a single sialyltransferase, ST6Gal I.  Mice deficient in ST6Gal I express no ligands on B cells resulting in an immuno-deficient phenotype.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
Although the crystal structure of CD22 has not yet been elucidated, structures of other siglecs, including sialoadhesin, siglec-5 and siglec-7 have shed insights into the nature of the ligand binding site of CD22.&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=CD22&amp;amp;maxresults=20 CFG database search results for CD22].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
&lt;br /&gt;
The CFG glycogene microarray has been used to show that ST6Gal I is downregulated  [https://www.functionalglycomics.org/glycomics/publicdata/microarray.jsp?resReqId=cfg_rRequest_2 &amp;#039;on T cells] upon activation suggesting that B cell &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands are reduced on activated T cells.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in [https://www.functionalglycomics.org/static/consortium/resources/resourcecoref16.shtml CD22] and the sialyltransferase, ST6Gal I, responsible for synthesis of its ligands ([https://www.functionalglycomics.org/glycomics/publicdata/phenotyping.jsp ST6Gal I]) distributed by the CFG have been instrumental in understanding the biology of CD22.&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The CFG&amp;#039;s glycan array was instrumental in identification of the [http://www.functionalglycomics.org/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_1792 high affinity ligands of CD22] as sialylated-sulfated glycans.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
&lt;br /&gt;
This paradigm is unique among the siglecs in that the cytoplasmic domain has six conserved tyrosine motifs, including three immunoreceptor tyrosine inhibitory motifs (ITIM), one ITIM-like motif, and a growth factor receptor bound protein2 (GRB2) motif.  However, other members of the homologous siglec family have contributed to an understanding of the glycan binding site of CD22, and general principles governing the interaction of CD22 with &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; and &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Paul Crocker, James Paulson&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=CD22&amp;diff=1042</id>
		<title>CD22</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=CD22&amp;diff=1042"/>
		<updated>2010-07-20T01:25:46Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;CD22 is predominantly expressed on B cells and is well documented as a regulator of B cell receptor (BCR) signaling&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;&amp;gt;Crocker PR, Paulson JC, Varki A. [http://www.ncbi.nlm.nih.gov/pubmed/17380156 Siglecs and their roles in the immune system]. &amp;#039;&amp;#039;Nat Rev Immunol&amp;#039;&amp;#039; 2007 Apr;7(4):255-66. Review.&amp;lt;/ref&amp;gt;. It is one of four siglecs that are highly conserved among mammals. This paradigm is unique among the siglecs in that the cytoplasmic domain has six conserved tyrosine motifs, including three immunoreceptor tyrosine inhibitory motifs (ITIM), one ITIM-like motif, and a growth factor receptor bound protein2 (GRB2) motif. These tyrosine motifs are involved in regulation of BCR signaling and also mediate its constitutive clathrin mediated endocytosis, an activity believed to be tied to its regulation of cell signaling. The preferred glycan ligand of CD22 differs significantly in humans and mice&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;&amp;gt;Kimura N, Ohmori K, Miyazaki K, Izawa M, Matsuzaki Y, Yasuda Y, Takematsu H, Kozutsumi Y, Moriyama A, Kannagi R. [http://www.ncbi.nlm.nih.gov/pubmed/17728258 Human B-lymphocytes express alpha2-6-sialylated 6-sulfo-N-acetyllactosamine serving as a preferred ligand for CD22/Siglec-2]. J&amp;#039;&amp;#039; Biol Chem&amp;#039;&amp;#039;. 2007 Nov 2;282(44):32200-7.&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Blixt O, Head S, Mondala T, Scanlan C, Huflejt ME, Alvarez R, Bryan MC, Fazio F, Calarese D, Stevens J, Razi N, Stevens DJ, Skehel JJ, van Die I, Burton DR, Wilson IA, Cummings R, Bovin N, Wong CH, Paulson JC. [http://www.ncbi.nlm.nih.gov/pubmed/15563589 Printed covalent glycan array for ligand profiling of diverse glycan binding proteins]. &amp;#039;&amp;#039;Proc Natl Acad Sci U S A&amp;#039;&amp;#039;. 2004 Dec 7;101(49):17033-8.&amp;lt;/ref&amp;gt;. While both recognize the sequence Siaa-2-6Galb-1-4GlcNAc expressed abundantly on B cells, murine CD22 prefers Neu5Gc (not found in humans) over Neu5Ac, while human CD22 exhibits highest affinity for sulfated sialoside, Neu5Aca-2-6Galb-1-4[6S]GlcNAc, demonstrating significant evolution of ligand specificity with conservation of function. Although CD22 recognizes ligands on the same cell in &amp;#039;&amp;#039;cis&amp;#039;&amp;#039;, it also binds to ligands in &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; if expressed on adjacent contacting cells. A major area of investigation is to understand the relative roles of &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; and &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands in CD22 function.&lt;br /&gt;
&lt;br /&gt;
[[Image:SiglecCD22.jpg|right|alt text]]&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
&lt;br /&gt;
CFG Participating Investigators (PIs) have made major contributions to the understanding of the biology of human and murine CD22. These include: Nicolai Bovin, Paul Crocker, Jamey Marth, David Nemazee, Lars Nitschke, Jim Paulson, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
Although CD22 is highly conserved throughout mammalian species, murine and human CD22 are known to exhibit significant differences in their specificities that appear to have evolved to compensate for changes in the glycan ligands expressed on B cells.  While both bind Sia&amp;amp;alpha;2-6Gal terminated glycans, murine CD22 prefers NeuGc (NeuGc&amp;amp;alpha;2-6Gal&amp;amp;beta;1-4GlcNAc), which is not found in humans.  In contrast, human human CD22 recognizes NeuAc and NeuGc with equal affinity. In addition, however, human CD22 exhibits highest affinity for a ligand with sulfate at the 6 position of GlcNAc (NeuAc&amp;amp;alpha;2-6Gal&amp;amp;beta;1-4[6S]GlcNAc).&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Kimura 2007&amp;quot;/&amp;gt;  9-O-acetylation of sialic acid abrogates binding of CD22, which is thought to regulate the binding of &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; ligands on B cells.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
CD22 is primarily expressed on mature B cells and to a lesser extent on memory B cells.  However, it is not expressed on pre-B cells and differentiated plasma cells.  Like many siglecs, CD22 interacts with endogenous ligands on B cells in &amp;#039;&amp;#039;cis&amp;#039;&amp;#039;, and on other cells, such as T cells and bone marrow vessel endothelial cells in &amp;#039;&amp;#039;trans&amp;#039;&amp;#039;.  Although  &amp;#039;&amp;#039;cis&amp;#039;&amp;#039; ligands of tend to mask the CD22 binding site, CD22 is able to interact with &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands on contacting cells (B cells and T cells), and to bind to synthetic multivalent ligands that have sufficient avidity.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
The ligands of CD22 are predominately the product of a single sialyltransferase, ST6Gal I.  Mice deficient in ST6Gal I express no ligands on B cells resulting in an immuno-deficient phenotype.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
Although the crystal structure of CD22 has not yet been elucidated, structures of other siglecs, including sialoadhesin, siglec-5 and siglec-7 have shed insights into the nature of the ligand binding site of CD22.&amp;lt;ref name=&amp;quot;Crocker 2007&amp;quot;/&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=CD22&amp;amp;maxresults=20 CFG database search results for CD22].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
&lt;br /&gt;
The CFG glycogene microarray has been used to show that ST6Gal I is downregulated  [https://www.functionalglycomics.org/glycomics/publicdata/microarray.jsp?resReqId=cfg_rRequest_2 &amp;#039;on T cells] upon activation suggesting that B cell &amp;#039;&amp;#039;trans&amp;#039;&amp;#039; ligands are reduced on activated T cells.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in [https://www.functionalglycomics.org/static/consortium/resources/resourcecoref16.shtml CD22] and the sialyltransferase, ST6Gal I, responsible for synthesis of its ligands ([https://www.functionalglycomics.org/glycomics/publicdata/phenotyping.jsp ST6Gal I]) distributed by the CFG have been instrumental in understanding the biology of CD22.&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The CFG&amp;#039;s glycan array was instrumental in identification of the [http://www.functionalglycomics.org/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_1792 high affinity ligands of CD22] as sialylated-sulfated glycans.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
&lt;br /&gt;
None. This paradigm is unique among the siglecs in that the cytoplasmic domain has six conserved tyrosine motifs, including three immunoreceptor tyrosine inhibitory motifs (ITIM), one ITIM-like motif, and a growth factor receptor bound protein2 (GRB2) motif.&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Paul Crocker, James Paulson&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=DC-SIGN&amp;diff=969</id>
		<title>DC-SIGN</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=DC-SIGN&amp;diff=969"/>
		<updated>2010-07-08T23:26:05Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Dendritic cell-specific intracellular adhesion molecule 3 (ICAM-3)-grabbing nonintegrin (DC-SIGN, CD209) is a C-type lectin that plays roles in both cell-cell and host-pathogen interactions, and thus serves as a model for both processes. This glycan-binding protein (GBP) paradigm also serves as a model for other members of the C-type lectin family expressed on dendritic cells.&amp;lt;br&amp;gt;&lt;br /&gt;
DC-SIGN is a type II membrane protein with a short aminoterminal cytoplasmic tail, a neck region and a single carboxyl terminal carbohydrate recognition domain (CRD)&amp;lt;ref name=&amp;quot;Geijtenbeek 2000&amp;quot;&amp;gt;Geijtenbeek TB, Torensma R, van Vliet SJ, van Duijnhoven GC, Adema GJ, van Kooyk Y and Figdor CG. 2000. Identification of DC-SIGN, a novel dendritic cell-specific ICAM-3 receptor that supports primary immune responses. Cell. 100:575-585&amp;lt;/ref&amp;gt;. The primary structure of the CRD contains conserved residues consistent with classical mannose-specific CRDs &amp;lt;ref name=&amp;quot;Feinberg 2001&amp;quot;&amp;gt;Feinberg H, Mitchell DA, Drickamer K and Weis WI. 2001. Structural basis for selective recognition of oligosaccharides by DC-SIGN and DC-SIGNR. Science. 294:2163-2166&amp;lt;/ref&amp;gt;. Multivalent binding of glycan ligands by DC-SIGN is dependent on correct organization and presentation of the CRDs at the neck domains, which are crucial for tetramerization of DC-SIGN &amp;lt;ref&amp;gt;Yu QD, Oldring AP, Powlesland AS, Tso CK, Yang C, Drickamer K and Taylor ME. 2009. Autonomous tetramerization domains in the glycan-binding receptors DC-SIGN and DC-SIGNR. J Mol Biol. 387:1075-1080&amp;lt;/ref&amp;gt;. The cytoplasmic tail of DC-SIGN contains internalization motifs involved in the ligand-induced internalization of DC-SIGN &amp;lt;ref&amp;gt;Engering A, Geijtenbeek TB, van Vliet SJ, Wijers M, van Liempt E, Demaurex N, Lanzavecchia A, Fransen J, Figdor CG, Piguet V and van Kooyk Y. 2002. The dendritic cell-specific adhesion receptor DC-SIGN internalizes antigen for presentation to T cells. J Immunol. 168:2118-2126&amp;lt;/ref&amp;gt;, and can activate signaling pathways &amp;lt;ref&amp;gt;Caparros E, Munoz P, Sierra-Filardi E, Serrano-Gomez D, Puig-Kroger A, Rodriguez-Fernandez JL, Mellado M, Sancho J, Zubiaur M and Corbi AL. 2006. DC-SIGN ligation on dendritic cells results in ERK and PI3k activation and modulates cytokine production. Blood. 107:3950-3958&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Gringhuis SI, den Dunnen J, Litjens M, van Het Hof B, van Kooyk Y and Geijtenbeek TB. 2007. C-type lectin DC-SIGN modulates toll-like receptor signaling via raf-1 kinase-dependent acetylation of transcription factor NF-kb. Immunity. 26:605-616&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Gringhuis SI, den Dunnen J, Litjens M, van der Vlist M and Geijtenbeek TB. 2009. Carbohydrate-specific signaling through the DC-SIGN signalosome tailors immunity to &amp;#039;&amp;#039;Mycobacterium tuberculosis&amp;#039;&amp;#039;, HIV-1 and &amp;#039;&amp;#039;Helicobacter pylori&amp;#039;&amp;#039;. Nat Immunol. 10:1081-1088&amp;lt;/ref&amp;gt;.&lt;br /&gt;
In mice several DC-SIGN-related proteins have been identified (SIGNR1-SIGNR8) &amp;lt;ref&amp;gt;Powlesland AS, Ward EM, Sadhu SK, Guo Y, Taylor ME and Drickamer K. 2006. Widely divergent biochemical properties of the complete set of mouse DC-SIGN-related proteins. J Biol Chem. 281:20440-20449&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
&lt;br /&gt;
Many investigators, both CFG Participating Investigators (PIs) and non-PIs using CFG resources, have led extensive studies on DC-SIGN, particularly regarding structure-function relationships, interactions with pathogens, and signaling functions in dendritic cells.&lt;br /&gt;
* PIs working on DC-SIGN include: Pedro Bonay, Angel Corbi, Kurt Drickamer, Juan Garcia-Vallejo, Donald Harn, Kayo Inaba, Benhur Lee, Olivier Neyrolles, Irma van Die, Yvette van Kooyk, William Weis, Martin Wild&lt;br /&gt;
* Non-PIs who have used CFG resources to study DC-SIGN include: Brigitte Gicquel, Arne Skerra, Ralph Steinman&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
DC-SIGN recognizes both internal branched mannose residues as well as terminal di-mannoses, α1-3 and α1-4 fucosylated glycan structures and certain N-aceltylglucosamine containing molecules on self proteins and/or pathogens &amp;lt;ref name=&amp;quot;Feinberg 2001&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Guo 2004&amp;quot;&amp;gt;Guo Y, Feinberg H, Conroy E, Mitchell DA, Alvarez R, Blixt O, Taylor ME, Weis WI and Drickamer K. 2004. Structural basis for distinct ligand-binding and targeting properties of the receptors DC-SIGN and DC-SIGNR. Nat Struct Mol Biol. 11:591-598&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Mitchell DA, Fadden AJ and Drickamer K. 2001. A novel mechanism of carbohydrate recognition by the C-type lectins DC-SIGN and DC-SIGNR. Subunit organization and binding to multivalent ligands. J Biol Chem. 276:28939-28945&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Liempt 2006&amp;quot;&amp;gt;van Liempt E, Bank CM, Mehta P, Garcia-Vallejo JJ, Kawar ZS, Geyer R, Alvarez RA, Cummings RD, Kooyk Y and van Die I. 2006. Specificity of DC-SIGN for mannose- and fucose-containing glycans. FEBS Lett. 580:6123-6131&amp;lt;/ref&amp;gt;&amp;lt;br&amp;gt;&amp;lt;br&amp;gt;&lt;br /&gt;
&amp;#039;&amp;#039;Endogenous ligands include&amp;#039;&amp;#039;&lt;br /&gt;
*Lewis blood group antigens Le&amp;lt;sup&amp;gt;X&amp;lt;/sup&amp;gt;, Le&amp;lt;sup&amp;gt;A&amp;lt;/sup&amp;gt;, Le&amp;lt;sup&amp;gt;Y&amp;lt;/sup&amp;gt; and Le&amp;lt;sup&amp;gt;B&amp;lt;/sup&amp;gt; &amp;lt;ref&amp;gt;Bogoevska V, Horst A, Klampe B, Lucka L, Wagener C and Nollau P. 2006. CEACAM1, an adhesion molecule of human granulocytes, is fucosylated by fucosyltransferase IX and interacts with DC-SIGN of dendritic cells via Lewis X residues. Glycobiology. 16:197-209&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bogoevska V, Nollau P, Lucka L, Grunow D, Klampe B, Uotila LM, Samsen A, Gahmberg CG and Wagener C. 2007. DC-SIGN binds ICAM-3 isolated from peripheral human leukocytes through Lewis X residues. Glycobiology. 17:324-333&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Garcia 2008&amp;quot;&amp;gt;Garcia-Vallejo JJ, van Liempt E, da Costa Martins P, Beckers C, van het Hof B, Gringhuis SI, Zwaginga JJ, van Dijk W, Geijtenbeek TB, van Kooyk Y and van Die I. 2008. DC-SIGN mediates adhesion and rolling of dendritic cells on primary human umbilical vein endothelial cells through Lewis Y antigen expressed on ICAM-2. Mol Immunol. 45:2359-2369&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Naarding MA, Ludwig IS, Groot F, Berkhout B, Geijtenbeek TB, Pollakis G and Paxton WA. 2005. Lewis x component in human milk binds DC-SIGN and inhibits HIV-1 transfer to CD4+ t lymphocytes. J Clin Invest. 115:3256-3264&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Nonaka 2008&amp;quot;&amp;gt;Nonaka M, Ma BY, Murai R, Nakamura N, Baba M, Kawasaki N, Hodohara K, Asano S and Kawasaki T. 2008. Glycosylation-dependent interactions of C-type lectin DC-SIGN with colorectal tumor-associated Lewis glycans impair the function and differentiation of monocyte-derived dendritic cells. J Immunol. 180:3347-3356&amp;lt;/ref&amp;gt;&amp;lt;br&amp;gt;&amp;lt;br&amp;gt;&lt;br /&gt;
&amp;#039;&amp;#039;Glycan ligands from pathogens include&amp;#039;&amp;#039;&lt;br /&gt;
*&amp;#039;&amp;#039;Mycobacterium tuberculosis&amp;#039;&amp;#039; lipoarabinomannan (ManLAM) and hexamannosylated phosphatidylinositol mannoside PIM6 &amp;lt;ref&amp;gt;Maeda N, Nigou J, Herrmann JL, Jackson M, Amara A, Lagrange PH, Puzo G, Gicquel B and Neyrolles O. 2003. The cell surface receptor DC-SIGN discriminates between mycobacterium species through selective recognition of the mannose caps on lipoarabinomannan. J Biol Chem. 278:5513-5516&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Driessen NN, Ummels R, Maaskant JJ, Gurcha SS, Besra GS, Ainge GD, Larsen DS, Painter GF, Vandenbroucke-Grauls CM, Geurtsen J and Appelmelk BJ. 2009. Role of phosphatidylinositol mannosides in the interaction between mycobacteria and DC-SIGN. Infect Immun. 77:4538-4547&amp;lt;/ref&amp;gt;&lt;br /&gt;
*&amp;#039;&amp;#039;Schistosoma mansoni&amp;#039;&amp;#039; glycans Le&amp;lt;sup&amp;gt;X&amp;lt;/sup&amp;gt;, GalNAc&amp;amp;beta;1-4(Fuc&amp;amp;alpha;1-3)GlcNAc-R (LDNF) and Fuc&amp;amp;alpha;1-3Gal&amp;amp;beta;1-4(Fuc&amp;amp;alpha;1-3)GlcNAc-R (pseudo-Le&amp;lt;sup&amp;gt;Y&amp;lt;/sup&amp;gt;) &amp;lt;ref&amp;gt;van Die I, van Vliet SJ, Nyame AK, Cummings RD, Bank CM, Appelmelk B, Geijtenbeek TB and van Kooyk Y. 2003. The dendritic cell-specific C-type lectin DC-SIGN is a receptor for &amp;#039;&amp;#039;Schistosoma mansoni&amp;#039;&amp;#039; egg antigens and recognizes the glycan antigen Lewis x. Glycobiology. 13:471-478&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Meyer S, van Liempt E, Imberty A, van Kooyk Y, Geyer H, Geyer R and van Die I. 2005. DC-SIGN mediates binding of dendritic cells to authentic pseudo-Lewis Y glycolipids of &amp;#039;&amp;#039;Schistosoma mansoni&amp;#039;&amp;#039; cercariae, the first parasite-specific ligand of DC-SIGN. J Biol Chem. 280:37349-37359&amp;lt;/ref&amp;gt;&lt;br /&gt;
*Virus-associated high-mannose type glycans &amp;lt;ref&amp;gt;Feinberg H, Castelli R, Drickamer K, Seeberger PH and Weis WI. 2007. Multiple modes of binding enhance the affinity of DC-SIGN for high mannose N-linked glycans found on viral glycoproteins. J Biol Chem. 282:4202-4209&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Lozach PY, Lortat-Jacob H, de Lacroix de Lavalette A, Staropoli I, Foung S, Amara A, Houles C, Fieschi F, Schwartz O, Virelizier JL, Arenzana-Seisdedos F and Altmeyer R. 2003. DC-SIGN and L-SIGN are high affinity binding receptors for hepatitis c virus glycoprotein E2. J Biol Chem. 278:20358-20366&amp;lt;/ref&amp;gt;&lt;br /&gt;
*&amp;#039;&amp;#039;Candida albicans&amp;#039;&amp;#039; N-linked mannan &amp;lt;ref&amp;gt;Cambi A, Netea MG, Mora-Montes HM, Gow NA, Hato SV, Lowman DW, Kullberg BJ, Torensma R, Williams DL and Figdor CG. 2008. Dendritic cell interaction with &amp;#039;&amp;#039;Candida albicans&amp;#039;&amp;#039; critically depends on N-linked mannan. J Biol Chem. 283:20590-20599&amp;lt;/ref&amp;gt;&lt;br /&gt;
*&amp;#039;&amp;#039;Escherichia coli&amp;#039;&amp;#039; K12 &amp;#039;&amp;#039;N&amp;#039;&amp;#039;-acetylglucosamine (GlcNAc) residues within core LPS &amp;lt;ref name=&amp;quot;Zhang 2006&amp;quot;&amp;gt;Zhang P, Snyder S, Feng P, Azadi P, Zhang S, Bulgheresi S, Sanderson KE, He J, Klena J and Chen T. 2006. Role of N-acetylglucosamine within core lipopolysaccharide of several species of gram-negative bacteria in targeting DC-SIGN (CD209). J Immunol. 177:4002-4011&amp;lt;/ref&amp;gt;&lt;br /&gt;
*&amp;#039;&amp;#039;Neisseria meningitides&amp;#039;&amp;#039; GlcNAc&amp;amp;beta;1-3Gal&amp;amp;beta;1-4Glc-R oligosaccharide of lgtB outer core LPS &amp;lt;ref name=&amp;quot;Steeghs 2006&amp;quot;&amp;gt;Steeghs L, van Vliet SJ, Uronen-Hansson H, van Mourik A, Engering A, Sanchez-Hernandez M, Klein N, Callard R, van Putten JP, van der Ley P, van Kooyk Y and van de Winkel JG. 2006. &amp;#039;&amp;#039;Neisseria meningitidis&amp;#039;&amp;#039; expressing Lgtb lipopolysaccharide targets DC-SIGN and modulates dendritic cell function. Cell Microbiol. 8:316-325&amp;lt;/ref&amp;gt;&lt;br /&gt;
*&amp;#039;&amp;#039;Helicobacter pylori&amp;#039;&amp;#039; LPS-associated Le&amp;lt;sup&amp;gt;X&amp;lt;/sup&amp;gt; glycan antigens &amp;lt;ref name=&amp;quot;Bergman 2004&amp;quot;&amp;gt;Bergman MP, Engering A, Smits HH, van Vliet SJ, van Bodegraven AA, Wirth HP, Kapsenberg ML, Vandenbroucke-Grauls CM, van Kooyk Y and Appelmelk BJ. 2004. &amp;#039;&amp;#039;Helicobacter py&amp;#039;&amp;#039;lori modulates the T helper cell 1/T helper cell 2 balance through phase-variable interaction between lipopolysaccharide and DC-SIGN. J Exp Med. 200:979-990&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Cellular expression of GBP and ligands ===&lt;br /&gt;
&lt;br /&gt;
DC-SIGN is expressed on dendritic cells and dendritic cell-like macrophages.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biosynthesis of ligands ===&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Structure ===&lt;br /&gt;
Crystal structures of DC-SIGN bound to high-mannose oligosaccharide and lacto-N-fucopentaose have been analyzed. &amp;lt;ref name=&amp;quot;Feinberg 2001&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Guo 2004&amp;quot;/&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;Biological roles for DC-SIGN include&amp;#039;&amp;#039;:&lt;br /&gt;
*DC-SIGN mediates interactions between dendritic cells (DCs) and resting T cells &amp;lt;ref name=&amp;quot;Geijtenbeek 2000&amp;quot;/&amp;gt; and between DCs and neutrophils &amp;lt;ref&amp;gt;van Gisbergen KP, Sanchez-Hernandez M, Geijtenbeek TB and van Kooyk Y. 2005. Neutrophils mediate immune modulation of dendritic cells through glycosylation-dependent interactions between MAC-1 and DC-SIGN. J Exp Med. 201:1281-1292&amp;lt;/ref&amp;gt;.&lt;br /&gt;
*DC-SIGN contributes to adhesion and rolling of DCs on primary human umbilical vein endothelial cells &amp;lt;ref&amp;gt;Geijtenbeek TB, Krooshoop DJ, Bleijs DA, van Vliet SJ, van Duijnhoven GC, Grabovsky V, Alon R, Figdor CG and van Kooyk Y. 2000. DC-SIGN-ICAM-2 interaction mediates dendritic cell trafficking. Nat Immunol. 1:353-357&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Garcia 2008&amp;quot;/&amp;gt;&lt;br /&gt;
*interactions of DC-SIGN with Lewis antigens on colorectal tumor cells impair the function and differentiation of dendritic cells &amp;lt;ref name=&amp;quot;Nonaka 2008&amp;quot;/&amp;gt;&lt;br /&gt;
*DC-SIGN can mediate bacterial adherence and phagocytosis &amp;lt;ref name=&amp;quot;Zhang 2006&amp;quot;/&amp;gt;.&lt;br /&gt;
*viruses target DC-SIGN to promote infection and spread to cells &amp;lt;ref&amp;gt;Geijtenbeek TB, Kwon DS, Torensma R, van Vliet SJ, van Duijnhoven GC, Middel J, Cornelissen IL, Nottet HS, KewalRamani VN, Littman DR, Figdor CG and van Kooyk Y. 2000. DC-SIGN, a dendritic cell-specific HIV-1-binding protein that enhances trans-infection of T cells. Cell. 100:587-597&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Navarro-Sanchez E, Altmeyer R, Amara A, Schwartz O, Fieschi F, Virelizier JL, Arenzana-Seisdedos F and Despres P. 2003. Dendritic-cell-specific ICAM3-grabbing non-integrin is essential for the productive infection of human dendritic cells by mosquito-cell-derived dengue viruses. EMBO Rep. 4:723-728&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Simmons G, Reeves JD, Grogan CC, Vandenberghe LH, Baribaud F, Whitbeck JC, Burke E, Buchmeier MJ, Soilleux EJ, Riley JL, Doms RW, Bates P and Pohlmann S. 2003. DC-SIGN and DC-SIGNR bind Ebola glycoproteins and enhance infection of macrophages and endothelial cells. Virology. 305:115-123&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Hodges A, Sharrocks K, Edelmann M, Baban D, Moris A, Schwartz O, Drakesmith H, Davies K, Kessler B, McMichael A and Simmons A. 2007. Activation of the lectin DC-SIGN induces an immature dendritic cell phenotype triggering Rho-GTPase activity required for HIV-1 replication. Nat Immunol. 8:569-577&amp;lt;/ref&amp;gt;&lt;br /&gt;
*activation of DC-SIGN by pathogens can contribute to T helper type 1 (Th)1 cell activity &amp;lt;ref name=&amp;quot;Steeghs 2006&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;van Stijn CM, Meyer S, van den Broek M, Bruijns SC, van Kooyk Y, Geyer R and van Die I. 2010. &amp;#039;&amp;#039;Schistosoma mansoni&amp;#039;&amp;#039; worm glycolipids induce an inflammatory phenotype in human dendritic cells by cooperation of TLR4 and DC-SIGN. Mol Immunol. 47:1544-1552&amp;lt;/ref&amp;gt;&lt;br /&gt;
*some pathogens target DC-SIGN to suppress Th1 cell development &amp;lt;ref name=&amp;quot;Bergman 2004&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Geijtenbeek TB, Van Vliet SJ, Koppel EA, Sanchez-Hernandez M, Vandenbroucke-Grauls CM, Appelmelk B and Van Kooyk Y. 2003. Mycobacteria target DC-SIGN to suppress dendritic cell function. J Exp Med. 197:7-17&amp;lt;/ref&amp;gt;&lt;br /&gt;
* the murine DC-SIGN homologue SIGNR3 contributes to early host defense against Mycobacterium tuberculosis &amp;lt;ref&amp;gt;Tanne A, Ma B, Boudou F, Tailleux L, Botella H, Badell E, Levillain F, Taylor ME, Drickamer K, Nigou J, Dobos KM, Puzo G, Vestweber D, Wild MK, Marcinko M, Sobieszczuk P, Stewart L, Lebus D, Gicquel B, Neyrolles O. 2009. A murine DC-SIGN homologue contributes to early host defense against &amp;#039;&amp;#039;Mycobacterium tub&amp;#039;&amp;#039;erculosis. J Exp Med 206: 2205-2220&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=DC-SIGN&amp;amp;maxresults=20 CFG database search results for DC-SIGN].&lt;br /&gt;
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=== Glycan profiling ===&lt;br /&gt;
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=== Glycogene microarray ===&lt;br /&gt;
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=== Knockout mouse lines ===&lt;br /&gt;
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Knockout mice for three potential DC-SIGN orthologues ([https://www.functionalglycomics.org/static/consortium/resources/DataCoreFdc.shtml DC-SIGN], [https://www.functionalglycomics.org/static/consortium/resources/DataCoreFsr1.shtml SIGNR1], and [https://www.functionalglycomics.org/static/consortium/resources/DataCoreFsr3.shtml SIGNR3]) were created by the CFG and distributed to PIs, and their [http://www.functionalglycomics.org/glycomics/publicdata/phenotyping.jsp phenotypes] were analyzed.&lt;br /&gt;
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=== Glycan array ===&lt;br /&gt;
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Glycan array analysis &amp;lt;ref name=&amp;quot;Guo 2004&amp;quot;/&amp;gt;&amp;lt;ref name=&amp;quot;Liempt 2006&amp;quot;/&amp;gt;and synthetic oligosaccharides were used to elucidate  DC-SIGN  [http://www.functionalglycomics.org/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_52_06122003 glycan-binding specificity] and analyze the mechanism of specific glycan binding. See all glycan array results for [http://www.functionalglycomics.org/glycomics/search/jsp/result.jsp?query=dc-sign&amp;amp;cat=coreh DC-SIGN here].&lt;br /&gt;
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== Related GBPs ==&lt;br /&gt;
Other dendritic cell lectins include langerin, DCIR, and DCAR. Paralogs on other cells include DC-SIGNR.&lt;br /&gt;
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== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Kurt Drickamer, Irma van Die, Yvette van Kooyk&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Cyanovirin-N_(CVN)&amp;diff=762</id>
		<title>Cyanovirin-N (CVN)</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Cyanovirin-N_(CVN)&amp;diff=762"/>
		<updated>2010-06-19T21:22:51Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
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&lt;div&gt;&amp;#039;&amp;#039;&amp;#039;Microbial Antiviral Proteins with GBP Activity&amp;#039;&amp;#039;&amp;#039;&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
Antiviral compounds made by eukaryotes that recognize unique glycan determinants represent a new paradigm in terms of understanding the innate immune system of primitive organisms and how that might relate to mammalian innate immune systems. Many mammalian GBPs act as innate immune defenders, including the C-type lectins [[Ficolins/Mannose-binding protein]] and other collectins. Interestingly, many of these bind glycan determinants often relatively rich in mannose and/or fucose. One promising anti-HIV-1 drug in development is cyanovirin-N, initially isolated from an extract of the cyanobacterium Nostoc ellipsosoprum&amp;lt;ref name=&amp;quot;Boyd1997&amp;quot;&amp;gt;Boyd, M.R., Gustafson, K.R., McMahon, J.B., Shoemaker, R.H., O&amp;#039;Keefe, B.R., Mori, T., Gulakowski, R.J., Wu, L., Rivera, M.I., Laurencot, C.M., Currens, M.J., Cardellina, J.H., 2nd, Buckheit, R.W., Jr., Nara, P.L., Pannell, L.K., Sowder, R.C., 2nd and Henderson, L.E. 1997. Discovery of cyanovirin-N, a novel human immunodeficiency virus-inactivating protein that binds viral surface envelope glycoprotein gp120: potential applications to microbicide development. Antimicrob Agents Chemother, 41, 1521-1530&amp;lt;/ref&amp;gt;. While CVN was originally thought to be an orphan lectin with little homology to any other known protein family&amp;lt;ref name=&amp;quot;Bewley1998&amp;quot;&amp;gt;Bewley, C.A., Gustafson, K.R., Boyd, M.R., Covell, D.G., Bax, A., Clore, G.M., and Gronenborn, A.M. 1998. Solution structure of cyanovirin-N, a potent HIV-inactivating protein. Nat Struct Biol 5, 571-578&amp;lt;/ref&amp;gt;, a family of CVN homologs, termed CVNHs, has been described&amp;lt;ref&amp;gt;Percudani, R., Montanini, B. and Ottonello, S. 2005. The anti-HIV cyanovirin-N domain is evolutionarily conserved and occurs as a protein module in eukaryotes. Proteins, 60, 670-678&amp;lt;/ref&amp;gt;. Members of this family are found in multicellular ascomycetous fungi and in ferns and share a 3-D fold&amp;lt;ref&amp;gt;Koharudin, L.M., Viscomi, A.R., Jee, J.G., Ottonello, S. and Gronenborn, A.M. 2008. The evolutionarily conserved family of cyanovirin-N homologs: structures and carbohydrate specificity. Structure, 16, 570-584&amp;lt;/ref&amp;gt;. A CVNH of the toxin-producing cyanobacterium Microcystis aeruginosa also binds high mannose-type glycans and is involved in cell–cell attachment of Microcystis&amp;lt;ref&amp;gt;Kehr, J.C., Zilliges, Y., Springer, A., Disney, M.D., Ratner, D.D., Bouchier, C., Seeberger, P.H., de Marsac, N.T. and Dittmann, E. 2006. A mannan binding lectin is involved in cell-cell attachment in a toxic strain of Microcystis aeruginosa. Mol Microbiol, 59, 893-906&amp;lt;/ref&amp;gt;.&lt;br /&gt;
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Defining the glycan binding specificity and mode of action for virucidal lectins may help to develop new therapeutic approaches directed at combating viral infections.&lt;br /&gt;
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&amp;#039;&amp;#039;&amp;#039;Cyanovirin-N&amp;#039;&amp;#039;&amp;#039;  (&amp;#039;&amp;#039;Nostoc ellipsosporum&amp;#039;&amp;#039; - a cyanobacterium)&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
Cyanovirin-N (CVN) was chosen as a paradigm because of its relevance to human disease and as an example of a new virucidal found in nature. CVN was originally isolated from the cyanobacterium Nostoc ellipsosporum, in a screening program for anti-HIV activities&amp;lt;ref name=&amp;quot;Boyd1997&amp;quot;/&amp;gt;. CVN is a small protein of 101 amino acids with two internal tandem repeats of ~50 amino acid. Its structure established a novel fold with no significant similarity to any other known protein&amp;lt;ref name=&amp;quot;Bewley1998&amp;quot;/&amp;gt;. It exhibits pseudo-symmetry and comprises two domains, each possessing an independent glycan binding site&amp;lt;ref&amp;gt;Bewley, C.A., Kiyonaka, S., and Hamachi, I. (2002). Site-specific discrimination by cyanovirin-N for alpha-linked trisaccharides comprising the three arms of Man(8) and Man(9). J Mol Biol 322, 881-889&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Barrientos, L.G., Matei, E., Lasala, F., Delgado, R., and Gronenborn, A.M. (2006). Dissecting carbohydrate-Cyanovirin-N binding by structure-guided mutagenesis: functional implications for viral entry inhibition. Protein Eng Des Sel 19, 525-535&amp;lt;/ref&amp;gt;. The protein can also exist as a domain-swapped dimer&amp;lt;ref&amp;gt;Yang, F., Bewley, C.A., Louis, J.M., Gustafson, K.R., Boyd, M.R., Gronenborn, A.M., Clore, G.M., and Wlodawer, A. (1999). Crystal structure of cyanovirin-N, a potent HIV-inactivating protein, shows unexpected domain swapping. J. Mol. Biol. 288, 403-412&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Barrientos, L.G., Louis, J.M., Botos, I., Mori, T., Han, Z., O&amp;#039;Keefe, B.R., Boyd, M.R., Wlodawer, A., and Gronenborn, A.M. (2002). The domain-swapped dimer of cyanovirin-N is in a metastable folded state: reconciliation of X-ray and NMR structures. Structure 10, 673-686&amp;lt;/ref&amp;gt;. CVN inhibits HIV entry into cells by interacting with the high mannose-type N-glycans on the envelope glycoprotein gp120 of HIV-1. CVN also binds to the glycoproteins of other enveloped viruses, such as SIV, Ebola, influenza and hepatitis C. Thus, CVN represents a new paradigm of microbial GBPs, wherein a unique glycan binding domain comprised of approximately 50 amino acids, exhibits specificity toward α1-2-linked mannose residues.&lt;br /&gt;
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== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
CFG Participating Investigators (PIs) who have contributed to studies of this paradigmatic protein include: Simone Ottonello (University of Parma, Italy) and Angela M. Gronenborn (University of Pittsburgh, USA).&lt;br /&gt;
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== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
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=== Carbohydrate ligands ===&lt;br /&gt;
The physiological ligand for Cyanovirin-N is not precisely known. However, based on extensive data on carbohydrate binding studies on this protein by NMR, X-ray, and glycan microarray screening on the CFG microarray, it is expected that CV-N would recognize any glycans that contain highly enriched alpha (1-&amp;gt;2) linkage - mannoses.&lt;br /&gt;
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=== Cellular expression ===&lt;br /&gt;
The Cyanovirin-N protein is expressed by Cyanobacterium (blue-green alga) Nostoc ellipsosporum.&lt;br /&gt;
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=== Structure ===&lt;br /&gt;
The structures of Cyanovirin-N can be found at http://www.pdb.org/ [http://www.pdb.org/pdb/results/results.do?outformat=&amp;amp;qrid=620C4AC9&amp;amp;tabtoshow=Current].&lt;br /&gt;
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Below are a few representations for the available structures of CV-N determined so far:&lt;br /&gt;
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The solution structure of wild type CV-N as a monomer (PDB:2EZM).&lt;br /&gt;
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[[File:CVN1.png]]&lt;br /&gt;
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The crystal structure of P51G mutant of CV-N as a swapped dimer (PDB:1L5B).&lt;br /&gt;
&lt;br /&gt;
[[File:CVN2.png]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
The crystal structure of swapped-dimeric CV-N in complex with hexamannose (PDB:3GXY).&lt;br /&gt;
&lt;br /&gt;
[[File:CVN3.png]]&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
In vitro, low nanomolar concentrations of either natural or recombinant CV-N irreversibly inactivate diverse laboratory strains and primary isolates of human immunodeficiency virus (HIV) type 1 as well as strains of HIV type 2 and simian immunodeficiency virus&amp;lt;ref name = &amp;quot;Boyd1997&amp;quot;/&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Cyanovirin-N&amp;amp;maxresults=20 CFG database search results for &amp;quot;cyanovirin-N&amp;quot;].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has not been conducted.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Not applicable.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The CFG has contributed glycans for various glycan specificity studies.&lt;br /&gt;
Glycan specificity analysis has been conducted for [http://www.functionalglycomics.org/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_3001 Cyanovirin-N] using the CFG glycan microarray as shown below.&lt;br /&gt;
&lt;br /&gt;
[[File:CVNglycan.png]]&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
A large family of CVNHs has been found in both eukaryotic fungi and cyanobacteria (see refs 3, 4 and 5 below).&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Angela Gronenborn&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Galectin-1&amp;diff=739</id>
		<title>Galectin-1</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Galectin-1&amp;diff=739"/>
		<updated>2010-06-15T14:09:21Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Galectin-1 is the best-studied of the prototypic galectins. The crystal structure of Galectin-1 is known, and was the first crystal structure identified for a prototypic galectin.&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
In addition, Galectin-1...&lt;br /&gt;
* was the first prototypic galectin for which a function was identified.&lt;br /&gt;
* binds novel N- and O-glycan determinants that are involved in cell signaling&amp;lt;ref name=&amp;quot;Leppanen 2005&amp;quot; /&amp;gt;&amp;lt;ref&amp;gt;Earl LA, Bi S, Baum LG. N- and O-glycans modulate galectin-1 binding, CD45 signaling, and T cell death. &amp;#039;&amp;#039;J Biol Chem&amp;#039;&amp;#039; 285, 2232-2244 (2010).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song X, &amp;#039;&amp;#039;et al&amp;#039;&amp;#039;. Novel fluorescent glycan microarray strategy reveals ligands for galectins. &amp;#039;&amp;#039;Chem Biol&amp;#039;&amp;#039; 16, 36-47 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Cooper 2008&amp;quot;&amp;gt;Cooper D, Norling LV, Perretti M. Novel insights into the inhibitory effects of Galectin-1 on neutrophil recruitment under flow. &amp;#039;&amp;#039;J Leukoc Biol&amp;#039;&amp;#039; 83, 1459-1466 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Stillman BN, &amp;#039;&amp;#039;et al&amp;#039;&amp;#039;. Galectin-3 and galectin-1 bind distinct cell surface glycoprotein receptors to induce T cell death.&amp;#039;&amp;#039; J Immunol&amp;#039;&amp;#039; 176, 778-789 (2006).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
* was the first prototypic galectin that was genetically ablated in mice; galectin-1 knockout mice have distinct phenotypes, including aberrant T lymphocyte expansion and increased susceptibility to autoimmune disease &amp;lt;ref&amp;gt;Rabinovich GA, Toscano MA. Turning &amp;quot;sweet&amp;quot; on immunity: galectin-glycan interactions in immune tolerance and inflammation. &amp;#039;&amp;#039;Nat Rev Immunol&amp;#039;&amp;#039; 9, 338-352 (2009). &amp;lt;/ref&amp;gt;.&lt;br /&gt;
* is the only prototypic galectin that has been administered in animal models of disease to assess therapeutic potential &amp;lt;ref&amp;gt;Rabinovich GA, Daly G, Dreja H, Tailor H, Riera CM, Hirabayashi J, Chernajovsky Y. Recombinant galectin-1 and its genetic delivery suppress collagen-induced arthritis via T cell apoptosis. &amp;#039;&amp;#039;J Exp Med&amp;#039;&amp;#039; 190, 385-398 (1999)&amp;lt;/ref&amp;gt;&lt;br /&gt;
* selectively regulates Th1, Th2 and Th17 cell survival&amp;lt;ref&amp;gt;Toscano MA, Bianco GA, Ilarregui JM, Croci DO, Correale J, Hernandez JD, Zwirner NW, Poirier F, Riley EM, Baum LG, Rabinovich GA. Differential glycosylation of Th1, Th2 and Th17 effector cells selectively regulates susceptibility to cell death. &amp;#039;&amp;#039;Nat Immunol&amp;#039;&amp;#039; 8, 825-834 (2007).&amp;lt;/ref&amp;gt;&lt;br /&gt;
* has novel dynamics and functions regarding it oxidized versus reduced status, as well as its dimerization status&amp;lt;ref&amp;gt;Stowell SR, &amp;#039;&amp;#039;et al&amp;#039;&amp;#039;. Ligand reduces galectin-1 sensitivity to oxidative inactivation by enhancing dimer formation. &amp;#039;&amp;#039;J Biol Chem&amp;#039;&amp;#039; 284, 4989-4999 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Leppanen 2005&amp;quot;&amp;gt;Leppanen A, Stowell S, Blixt O, Cummings RD. Dimeric galectin-1 binds with high affinity to alpha2,3-sialylated and non-sialylated terminal N-acetyllactosamine units on surface-bound extended glycans. &amp;#039;&amp;#039;J Biol Chem&amp;#039;&amp;#039; 280, 5549-5562 (2005). &amp;lt;/ref&amp;gt;.&lt;br /&gt;
* is involved in lymphocyte trafficking and leukocyte recruitment&amp;lt;ref name=&amp;quot;Cooper 2008&amp;quot; /&amp;gt;&amp;lt;ref&amp;gt;Norling LV, Sampaio AL, Cooper D, Perretti M. Inhibitory control of endothelial galectin-1 on in vitro and in vivo lymphocyte trafficking. &amp;#039;&amp;#039;Faseb J&amp;#039;&amp;#039; 22, 682-690 (2008). &amp;lt;/ref&amp;gt;.&lt;br /&gt;
* promotes the differentiation of tolerogenic dendritic cells and plays a pivotal role in fetomaternal tolerance &amp;lt;ref&amp;gt;Ilarregui JM, Croci DO, Bianco GA, Toscano MA, Salatino M, Vermeulen ME, Geffner JR, Rabinovich GA.&amp;#039;&amp;#039;Nat Immunol&amp;#039;&amp;#039; 10, 981-991 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Blois SM, &amp;#039;&amp;#039;et al&amp;#039;&amp;#039;. A pivotal role for galectin-1 in fetomaternal tolerance. &amp;#039;&amp;#039;Nat Med&amp;#039;&amp;#039; 13,1450-1457 (2007).&amp;lt;/ref&amp;gt;&lt;br /&gt;
* contributes to tumor cell evasion of immune responses.&amp;lt;ref&amp;gt;Rubinstein N, Alvarez M, Zwirner NW, Toscano MA, Ilarregui JM, Bravo A, Mordoh J, Fainboim L, Podhajcer OL, Rabinovich GA. &amp;#039;&amp;#039;Cancer Cell&amp;#039;&amp;#039; 5, 241-251 (2004).&amp;lt;/ref&amp;gt;&lt;br /&gt;
* demonstrates novel distributions in muscle cells versus non-muscle cells&amp;lt;ref&amp;gt;Dias-Baruffi M, &amp;#039;&amp;#039;et al&amp;#039;&amp;#039;. Differential expression of immunomodulatory galectin-1 in peripheral leukocytes and adult tissues and its cytosolic organization in striated muscle. &amp;#039;&amp;#039;Glycobiology&amp;#039;&amp;#039; &amp;#039;&amp;#039;&amp;#039;In Press&amp;#039;&amp;#039;&amp;#039;. (2010).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
* ligands are modulated by their differential sialylation that is also associated with glycoprotein positioning in membranes&amp;lt;ref&amp;gt;Cha SK, &amp;#039;&amp;#039;et al&amp;#039;&amp;#039;. Removal of sialic acid involving Klotho causes cell-surface retention of TRPV5 channel via binding to galectin-1. &amp;#039;&amp;#039;Proc Natl Acad Sci U S A&amp;#039;&amp;#039; 105, 9805-9810 (2008).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
&lt;br /&gt;
CFG Participating Investigators (PIs) contributing to the understanding of Galectin-1 include: Linda Baum, C. Fred Brewer, Richard Cummings, Anne Dell, Ten Feizi, M.G. Finn, Thomas Gerken, Benhur Lee, J. Michael Pierce, Mauro Perretti, Gabriel Rabinovich, James Rini, Sachiko Sato, Gerald Schwarting, Pamela Stanley, Victor Thijssen, Gerardo Vasta, John Wang&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;The ligand of galectin-1 has been shown to by Gal&amp;amp;beta;1-4GlcNAc (or LacNAc).&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;Galectin-1 is expressed in many cell types including muscle, epithelial and endothelial cells. Within the immune system this GBP is considerably up-regulated in activated T lymphocytes, macrophages, uterine NK cells and regulatory T cells.&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;Galectin-1 can be found as a monomer as well as a non-covalent homodimer composed of&lt;br /&gt;
subunits of 14.5 kDa, each containing an identical CRD.&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;Galectin-1 is involved in immunoregulation, cytokine secretion, host-pathogen interactions, cell adhesion and migration and tumor-immune escape.&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=galectin-1&amp;amp;maxresults=20 CFG database search results for Galectin-1].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;Glycan profiling of cells known to express Galectin-1 has been done by the CFG analytical core (e.g. T-lymphocytes)&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
CFG-generated [http://www.functionalglycomics.org/static/consortium/resources/resourcecoref6.shtml Galectin-1 knockout mice] have been used to study the biological functions of this paradigm GBP. The [http://www.functionalglycomics.org/glycomics/publicdata/phenotyping.jsp phenotype] of Galectin-1 knockout mice was analyzed by the CFG.&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
Investigators have made extensive use of carbohydrate compounds and [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=galectin-1&amp;amp;maxresults=20 glycan microarrays] to study ligand binding specificity of Galectin-1.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
Galectins-2, -5, -7, -10, -11, -13, and -14&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Linda Baum, Richard Cummings, Gabriel Rabinovich&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=580</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=580"/>
		<updated>2010-06-10T13:57:21Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Glycogene microarray */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human[http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Human&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit] and mouse[http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Mouse&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit] eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils that relates to the enzymes required for expression of cis ligands of Siglec-F on these cells[http://www.functionalglycomics.org/static/coreE/flash/search.swf?maExpKey=100393].&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] and its murine paralog, Siglec-F[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004], was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=579</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=579"/>
		<updated>2010-06-10T13:48:09Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Glycan profiling */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human[http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Human&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit] and mouse[http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?5=Mouse&amp;amp;15=&amp;amp;10=&amp;amp;9=Eosinophils+&amp;amp;operation=refine&amp;amp;templateKey=2&amp;amp;12=CellType&amp;amp;submit=submit] eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] and its murine paralog, Siglec-F[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004], was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=578</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=578"/>
		<updated>2010-06-10T13:42:52Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Glycan profiling */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human and mouse eosinophils[http://www.functionalglycomics.org/glycomics/common/jsp/samples/searchSample.jsp?templateKey=2&amp;amp;12=CellType&amp;amp;operation=refine].&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] and its murine paralog, Siglec-F[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004], was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=492</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=492"/>
		<updated>2010-05-30T23:48:41Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human and mouse eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] and its murine paralog, Siglec-F[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_47_10132004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_58_07262004], was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=491</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=491"/>
		<updated>2010-05-30T23:43:01Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Carbohydrate ligands */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for Siglec-8 has been deduced from glycan microarray screening on the CFG microarray[http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v3_49_09152004][http://www.functionalglycomics.org:80/glycomics/HServlet?operation=view&amp;amp;sideMenu=no&amp;amp;psId=primscreen_GLYCAN_v2_19_02202004] to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
[[File:Siglec8 SiglecF.jpg]]&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human and mouse eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for Siglec-8 and its murine paralog, Siglec-F, was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=470</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=470"/>
		<updated>2010-05-15T04:19:51Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: /* Carbohydrate ligands */&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
The high affinity ligand for siglec-8 has been deduced from glycan microarray screening on the CFG microarray to be NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Structure ===&lt;br /&gt;
&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
&lt;br /&gt;
=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human and mouse eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils.&lt;br /&gt;
&lt;br /&gt;
=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
&amp;lt;br&amp;gt;&lt;br /&gt;
&lt;br /&gt;
=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for siglec-8 and its murine paralog, Siglec-F, was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
&lt;br /&gt;
== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
&lt;br /&gt;
== References ==&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;br /&gt;
&lt;br /&gt;
== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
	<entry>
		<id>https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=469</id>
		<title>Siglec-8</title>
		<link rel="alternate" type="text/html" href="https://glycan.mit.edu/CFGparadigms/index.php?title=Siglec-8&amp;diff=469"/>
		<updated>2010-05-15T04:17:55Z</updated>

		<summary type="html">&lt;p&gt;Jim Paulson: &lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Siglec-8 is a human siglec expressed predominantly on eosinophils and mast cells, and is a paradigm for the rapidly evolving sub-family of CD33-related siglecs that are expressed on various white blood cells&amp;lt;ref&amp;gt;Crocker, P. R., Paulson, J. C. &amp;amp; Varki, A. Siglecs and their roles in the immune system. Nat Rev Immunol 7, 255-266 (2007).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Kikly, K.K., Bochner, B.S., et al. [http://www.ncbi.nlm.nih.gov/pubmed/10856141 Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells, and basophils.] J Allergy Clin Immunol 105, 1093-100 (2000)&amp;lt;/ref&amp;gt;&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;&amp;gt;Bochner, B.S. [http://www.ncbi.nlm.nih.gov/pubmed/19178537 Siglec-8 on human eosinophils and mast cells, and Siglec-F on murine eosinophils, are functionally related inhibitory receptors.] Clin Exp Allergy 39, 317-324 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd, H. et al. Siglec-8. A novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 275, 861-866 (2000).&amp;lt;/ref&amp;gt;. A characteristic feature of Siglec-8 and most other CD33-related siglecs is a cytoplasmic domain with a single immunoreceptor tyrosine inhibitory motif (ITIM) and a single ITIM-like motif that participate in siglec-mediated regulation of cell signaling and endocytosis. While there is no clear ortholog in mice, Siglec-F has been documented as a functional paralog that has a similar expression pattern on murine leukocytes and similar ligand specificity&amp;lt;ref name=&amp;quot;Bochner 2009&amp;quot;/&amp;gt;&amp;lt;ref&amp;gt;Tateno, H., Crocker, P. R. &amp;amp; Paulson, J. C. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred&lt;br /&gt;
glycan ligand. Glycobiology 15, 1125-1135 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zhang, M. et al. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse&lt;br /&gt;
eosinophils. Blood 109, 4280-4287 (2007).&amp;lt;/ref&amp;gt;. Siglec-8, and its murine paralog Siglec-F, recognize a ligand containing both sialic acid and sulfate (NeuAcα2-3[6S]Galβ1-4G[Fucα1-3]GlcNAc-), a specificity that is distinct from all other siglecs. Ligation of Siglec-8 (or Siglec-F) with antibodies or polymeric ligands induces apoptosis of eosinophils, suggesting a therapeutic approach for treating eosinophil (or mast cell) mediated disease by targeting Siglec-8&amp;lt;ref&amp;gt;O&amp;#039;Reilly, M. K. &amp;amp; Paulson, J. C. Siglecs as targets for therapy in immune-cell-mediated disease. Trends Pharmacol Sci 30, 240-248 (2009).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Zimmermann, N. et al. Siglec-F antibody administration to mice selectively reduces blood and tissue&lt;br /&gt;
eosinophils. Allergy 63, 1156-1163 (2008).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Bochner, B. S. et al. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 280, 4307-&lt;br /&gt;
4312 (2005).&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku, E., Aizawa, H., Hudson, S. A. &amp;amp; Bochner, B. S. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 101, 5014-5020 (2003).&amp;lt;/ref&amp;gt;.&lt;br /&gt;
&lt;br /&gt;
== CFG Participating Investigators contributing to the understanding of this paradigm ==&lt;br /&gt;
Participating Investigators (PIs) of the CFG have made major contributions to the understanding of the biology of Siglec-8 and its murine paralog, Siglec-F. These include: Bruce Bochner, Nicolai Bovin, Paul Crocker, James Paulson, Ronald Schnaar, Ajit Varki&lt;br /&gt;
&lt;br /&gt;
== Progress toward understanding this GBP paradigm ==&lt;br /&gt;
&lt;br /&gt;
=== Carbohydrate ligands ===&lt;br /&gt;
NeuAcα2-3(6-SO3)Galβ1-4(Fucα1-3)GlcNAc [6&amp;#039;Su-SLeX]&amp;lt;ref&amp;gt;Bochner BS, Alvarez RA, Mehta P, Bovin NV, Blixt O, White JR, Schnaar RL. Glycan array screening reveals a candidate ligand for Siglec-8. J Biol Chem 2005; 280:4307-12&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Tateno H, Crocker PR, Paulson JC. Mouse Siglec-F and human Siglec-8 are functionally convergent paralogs that are selectively expressed on eosinophils and recognize 6&amp;#039;-sulfo-sialyl Lewis X as a preferred glycan ligand. Glycobiology 2005; 15:1125-35&amp;lt;/ref&amp;gt;&lt;br /&gt;
&lt;br /&gt;
[[File:6pso3slex.jpg]]&lt;br /&gt;
&lt;br /&gt;
For Siglec-F, histologic studies suggest the presence of an &amp;amp;alpha;2,3-linked sialylated glycoprotein ligand expressed by airway epithelium.  Its constitutive expression requires the enzyme St3Gal3.&amp;lt;ref&amp;gt;Guo JP, Brummet ME, Myers AC, Na HJ, Rowland E, Schnaar RL, Zheng T, Zhu Z, Bochner BS. Characterization of expression of glycan ligands for Siglec-F in normal mouse lungs. Am J Respir Cell and Molec Biol 2010 Apr 15 [Epub ahead of print] 2010 and &amp;lt;/ref&amp;gt;  Levels of this ligand are increased during allergic pulmonary inflammation.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
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=== Cellular expression ===&lt;br /&gt;
Human: Eosinophils, Mast Cells, Basophils (weak)&amp;lt;ref&amp;gt;Kikly KK, Bochner BS, Freeman S, Tan KB, Gallagher KT, D&amp;#039;Alessio K, Holmes SD, Abrahamson J, Hopson CB, Fischer EI, Erickson-Miller CL, Tachimoto H, Schleimer RP, White JR. Identification of SAF-2, a novel siglec expressed on eosinophils, mast cells and basophils. J Allergy Clin Immunol 2000; 105:1093-100&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Floyd H, Ni J, Cornish AL, Zeng Z, Liu D, Carter KC, Steel J, Crocker PR. Siglec-8: a novel eosinophil-specific member of the immunoglobulin superfamily. J Biol Chem 2000; 275:861-6&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Yokoi H, Myers A, Matsumoto K, Crocker PR, Saito H, Bochner BS. Alteration and acquisition of Siglecs during in vitro maturation of CD34+ progenitors into human mast cells. Allergy 2006; 61:769-76&amp;lt;/ref&amp;gt;&lt;br /&gt;
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=== Structure ===&lt;br /&gt;
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=== Biological roles of GBP-ligand interaction ===&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;In vitro&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Eosinophil apoptosis.&amp;lt;ref&amp;gt;Nutku E, Aizawa H, Hudson SA, Bochner BS. Ligation of Siglec-8: a selective mechanism for induction of human eosinophil apoptosis. Blood 2003; 101:5014-20&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Nutku E, Hudson SA, Bochner BS. Mechanism of Siglec-8-induced human eosinophil apoptosis: role of caspases and mitochondrial injury. Biochem Biophys Res Commun 2005; 336:918-24&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;1Nutku-Bilir E, Hudson SA, Bochner BS. Interleukin-5 priming of human eosinophils alters Siglec-8 mediated apoptosis pathways. Am J Respir Cell Mol Biol 2008; 38:121-4&amp;lt;/ref&amp;gt;&lt;br /&gt;
Inhibition of mast cell mediator release.&amp;lt;ref&amp;gt;Yokoi H, Choi OH, Hubbard W, Lee H-S, Canning BJ, Lee HH, Ryu S-D, Bickel CA, Hudson SA, MacGlashan DW, Jr., Bochner BS. Inhibition of FcεRI-dependent mediator release and calcium flux from human mast cells by Siglec-8 engagement. J Allergy Clin Immunol 2008; 121:499-505&amp;lt;/ref&amp;gt;&lt;br /&gt;
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&amp;#039;&amp;#039;&amp;#039;In vivo (for Siglec-F)&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
Antibody administration to mice causes selective depletion of eosinophils in blood and gastrointestinal tissues via apoptosis.&amp;lt;ref&amp;gt;Zimmermann N, McBride ML, Yamada Y, Hudson SA, Jones C, Cromie KD, Crocker PR, Rothenberg ME, Bochner BS. Siglec-F antibody administration to mice selectively reduces blood and tissue eosinophils. Allergy 2008; 63:1156-63&amp;lt;/ref&amp;gt;  They are also effective in reversing some sequelae of mouse models of eosinophilic gastroenteritis and asthma.&amp;lt;ref&amp;gt;Song DJ, Cho JY, Miller M, Strangman W, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody inhibits oral egg allergen induced intestinal eosinophilic inflammation in a mouse model. Clin Immunol 2009; 131:157-69&amp;lt;/ref&amp;gt;&amp;lt;ref&amp;gt;Song DJ, Cho JY, Lee SY, Miller M, Rosenthal P, Soroosh P, Croft M, Zhang M, Varki A, Broide DH. Anti-Siglec-F antibody reduces allergen-induced eosinophilic inflammation and airway remodeling. J Immunol 2009; 183:5333-41&amp;lt;/ref&amp;gt;&lt;br /&gt;
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== CFG resources used in investigations ==&lt;br /&gt;
The best examples of CFG contributions to this paradigm are described below, with links to specific data sets. For a complete list of CFG data and resources relating to this paradigm, see the [http://www.functionalglycomics.org/glycomics/search/jsp/landing.jsp?query=Siglec-8&amp;amp;maxresults=20 CFG database search results for Siglec-8].&lt;br /&gt;
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=== Glycan profiling ===&lt;br /&gt;
Glycan structure analysis has been conducted by the CFG for human and mouse eosinophils.&lt;br /&gt;
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=== Glycogene microarray ===&lt;br /&gt;
Analysis has been conducted on glycosyltransferase expression using the glycogene microarray for murine eosinophils.&lt;br /&gt;
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=== Knockout mouse lines ===&lt;br /&gt;
Mice deficient in Siglec-F have normal blood and bone marrow eosinophils at baseline, but develop exaggerated bone marrow, blood and lung eosinophilia after allergen sensitization and challenge.&amp;lt;ref&amp;gt;Zhang M, Angata T, Cho JY, Miller M, Broide DH, Varki A. Defining the in vivo function of Siglec-F, a CD33-related Siglec expressed on mouse eosinophils. Blood 2007; 109:4280-7&amp;lt;/ref&amp;gt;&lt;br /&gt;
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=== Glycan array ===&lt;br /&gt;
The discovery of the ligand for siglec-8 and its murine paralog, Siglec-F, was made by investigator-initiated resource requests for glycan array analysis and carbohydrate compounds.&lt;br /&gt;
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== Related GBPs ==&lt;br /&gt;
hSiglec-3 (CD33), Siglec-5, Siglec-6, Siglec, 7, Siglec-9, Siglec-10, Siglec-11, Siglec-F, Siglec-E, Siglec-G&lt;br /&gt;
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== References ==&lt;br /&gt;
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== Acknowledgements ==&lt;br /&gt;
The CFG is grateful to the following PIs for their contributions to this wiki page: Bruce Bochner, Paul Crocker, James Paulson, Ron Schnaar&lt;/div&gt;</summary>
		<author><name>Jim Paulson</name></author>
	</entry>
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